BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C04LP1|AL425659
(759 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1644 1489 0.0
>3x_Contig1644
Length = 13148
Score = 1489 bits (749), Expect = 0.0
Identities = 755/759 (99%)
Strand = Plus / Plus
Query: 1 ttttcttatccgatttgaataaatagacagttatgatagttcacaacgtatatcagamct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 7596 ttttcttatccgatttgaataaatagacagttatgatagttcacaacgtatataagaact 7655
Query: 61 aacataaatmataaatagcaggcactttatgatatgacggcctgatgctgcagtgttttg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7656 aacataaataataaatagcaggcactttatgatatgacggcctgatgctgcagtgttttg 7715
Query: 121 tgtgtgtttatgtgtgtgttttgcttgattcttggagtagaaacttataagtcttgggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7716 tgtgtgtttatgtgtgtgttttgcttgattcttggagtagaaacttataagtcttgggca 7775
Query: 181 tcaagggtcttgaattttataggtttgttttcttgagggaaatcaataccgttttcaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7776 tcaagggtcttgaattttataggtttgttttcttgagggaaatcaataccgttttcaagt 7835
Query: 241 aatactacaaaggccttggtgaattctttaaagaatgtgtcttggtcgtttgcmaattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 7836 aatactacaaaggccttggtgaattctttaaagaatgtgtcttggtcgtttgcaaattct 7895
Query: 301 ttcacgataggcaagtatttcggatcctgtaccaaggccatatctgttggtaacatcatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7896 ttcacgataggcaagtatttcggatcctgtaccaaggccatatctgttggtaacatcatc 7955
Query: 361 cagcccttatcgttgacgtattgtttgttaccggcatcgttagtgatgaggtcccatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7956 cagcccttatcgttgacgtattgtttgttaccggcatcgttagtgatgaggtcccatttt 8015
Query: 421 tcgtttagcaggttgttgtagaattcattggtgaagatattggtggcagcaccccatggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8016 tcgtttagcaggttgttgtagaattcattggtgaagatattggtggcagcaccccatggg 8075
Query: 481 ccttcgaagccagagttcttcaaatgtgtcttacccaaagcatgcgcacccaacaatgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8076 ccttcgaagccagagttcttcaaatgtgtcttacccaaagcatgcgcacccaacaatgca 8135
Query: 541 actacttgtctatcttcgaagtttagtctgtggaagaagcatctcacgtatttcgcatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8136 actacttgtctatcttcgaagtttagtctgtggaagaagcatctcacgtatttcgcatct 8195
Query: 601 ttagaagcatcaggtaatctaccgttttctggagtagtatcctcaggttggtccacacga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8196 ttagaagcatcaggtaatctaccgttttctggagtagtatcctcaggttggtccacacga 8255
Query: 661 ccagatctccaaggaattgtgggaccttgcatctcttgaatcgccgtaacgccagccaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8256 ccagatctccaaggaattgtgggaccttgcatctcttgaatcgccgtaacgccagccaaa 8315
Query: 721 ctatataaatcaccatgagataaccaagggtacttctcg 759
|||||||||||||||||||||||||||||||||||||||
Sbjct: 8316 ctatataaatcaccatgagataaccaagggtacttctcg 8354
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4908
Number of Sequences: 1807
Number of extensions: 4908
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 759
length of database: 10,358,551
effective HSP length: 16
effective length of query: 743
effective length of database: 10,329,639
effective search space: 7674921777
effective search space used: 7674921777
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)